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5-Ethynyl-2'-deoxyuridine Sale

(Synonyms: 5-乙炔基-2-脱氧尿苷) 目录号 : GC42504

5-乙炔基-2′-脱氧尿苷(EdU),作为胸苷类似物,是取代嘧啶环5位甲基的末端炔基,在合成过程中可以很容易地结合到DNA中。

5-Ethynyl-2'-deoxyuridine Chemical Structure

Cas No.:61135-33-9

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10mM (in 1mL DMSO)
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50mg
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250mg
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Sample solution is provided at 25 µL, 10mM.

Description

5-ethynyl-2′-deoxyuridine (EdU), as a thymidine analoghas, a terminal alkyne group replacing a methyl group at the 5 position of the pyrimidine ring and can be readily incorporated into DNA during synthesis[1]. EdU is a inhibitor of the cell growth of human breast cancer cells (MCF-7 and MDA-MP-231) with the IC50 of 0.4 μM for MCF-7 cells and 4.4 μM for MDA-MB-231 cells[2].

In vitro, 10 μMEdU induced gamma-H2AX foci for 51D1 and KO40 in CHO cells for DNA damage responses[3]. In vitro experiment it shown that A549 cells were treated with 20 μM EdU for 6 h increased the level of expression of γH2AX and ATM-S1981P by 88% and 116%, respectively[4].

In vivo efficacy test it shown that femalJKe mice were administrated 10, 20, 50, 100 or 200 mg/kg EdU intraperitoneally, there is an increase in the number of EdU positive cells in the DG slightlyin a dose-dependent manner[5]. In vivo, few EdU-positive cells were observed in Wistar and GK rats at a dose of 5 mg/kg and 25 mg/kg EdU intraperitoneally. Prominent EdU-positive cells were observed in Wistar and GK rats at a dose of 100 mg/kg and 200 mg/kg, respectively[6]. In vivo, use of 5-Ethynyl-2'-deoxyuridine (EdU) incorporation to in vivo monitor T lymphocyte proliferation by flow cytometry with an adoptive transfer model. The result shown that the percentage of EdU-positive cells increased in a dose-dependent manner, and the saturated dose of EdU was 20mg/kg. Intraperitoneal and intravenous injection had no differences in lymphocyte proliferation detection with EdU in vivo[7].

References:

[1] Kaiser CL, et al. 5-Ethynyl-2'-deoxyuridine labeling detects proliferating cells in the regenerating avian cochlea. Laryngoscope. 2009 Sep;119(9):1770-5.

[2] Meneni S, et al. (2007) 5-Alkynyl-2′-deoxyuridines: chromatography-free synthesis and cytotoxicity evaluation against human breast cancer cells. Bioorg Med Chem 15: 3082–3088.

[3] Haskins JS, et al. Evaluating the Genotoxic and Cytotoxic Effects of Thymidine Analogs, 5-Ethynyl-2'-Deoxyuridine and 5-Bromo-2'-Deoxyurdine to Mammalian Cells. Int J Mol Sci. 2020 Sep 10;21(18):6631.

[4] Zhao H, et al. DNA damage signaling, impairment of cell cycle progression, and apoptosis triggered by 5-ethynyl-2'-deoxyuridine incorporated into DNA. Cytometry A. 2013 Nov;83(11):979-88.

[5] Zeng C, et al. Evaluation of 5-ethynyl-2'-deoxyuridine staining as a sensitive and reliable method for studying cell proliferation in the adult nervous system. Brain Res. 2010 Mar 10;1319:21-32.

[6] Guo J, Li D, et al. Detecting DNA synthesis of neointimal formation after catheter balloon injury in GK and in Wistar rats: using 5-ethynyl-2'-deoxyuridine. Cardiovasc Diabetol. 2012 Dec 13;11:150.

[7] Sun X, Zhang C, et al. Flow cytometric analysis of T lymphocyte proliferation in vivo by EdU incorporation. Int Immunopharmacol. 2016 Dec;41:56-65.

5-乙炔基-2′-脱氧尿苷(EdU),作为胸苷类似物,是取代嘧啶环5位甲基的末端炔基,在合成过程中可以很容易地结合到DNA中[1]。EdU是人类乳腺癌症细胞(MCF-7和MDA-MP-231)的细胞生长抑制剂,MCF-7细胞的IC50为0.4 μM,MDA-MB-231细胞为4.4μM[2]

在体外,10 μM EdU诱导CHO细胞中51D1和KO40的γ-H2AX焦点产生DNA损伤反应[3]。体外实验表明,用20 μM EdU处理A549细胞6小时,γH2AX和ATM-S1981P的表达水平分别提高了88%和116%[4]

体内疗效测试表明,雌性JKe小鼠腹膜内给予10、20、50、100或200 mg/kg EdU,DG中EdU阳性细胞的数量略有增加,呈剂量依赖性[5]。在体内,在Wistar和GK大鼠中观察到腹膜内剂量为5 mg/kg和25 mg/kg EdU的EdU阳性细胞很少。在Wistar和GK大鼠中分别观察到剂量为100 mg/kg和200 mg/kg的显著EdU阳性细胞[6]。在体内,使用5-乙炔基-2'-脱氧尿苷(EdU)掺入通过过继转移模型的流式细胞术在体内监测T淋巴细胞增殖。结果表明,EdU阳性细胞的百分比呈剂量依赖性增加,EdU的饱和剂量为20 mg/kg。腹膜内注射和静脉注射在体内用EdU检测淋巴细胞增殖方面没有差异[7]

实验参考方法

Cell experiment [1]:

Cell lines

HeLa cells

Preparation Method

HeLa cells were incubated with either 10 µM EdU or 10 µM EdC for 4 h. Then, the detection of EdU and DNA using DAPI was performed.

Reaction Conditions

10 µM; 4h

Applications

The result shown approximately 75% of the cells contained a signal corresponding to the localization of incorporated EdU.

Animal experiment [2]:

Animal models

bird

Preparation Method

In order to label mitotically active supporting cells, a single, subcutaneous injection of EdU (50 mg/kg) in sterile, phosphate buffered saline (PBS, pH 7.4) was administered to each bird 72h after the gentamicin injection.

Dosage form

50 mg/kg; s.c.

Applications

When EdU is injected at 72h and allowed to incorporate for 4h, some of the supporting cells that first entered S phase around 65h are labeled with EdU at the end of their S phase. They are able to reach the mitotic phase and some even divide during this time.

References:

LigasovÁ A, et al. Dr Jekyll and Mr Hyde: a strange case of 5-ethynyl-2'-deoxyuridine and 5-ethynyl-2'-deoxycytidine. Open Biol. 2016 Jan;6(1):150172.
Kaiser CL, et al. 5-Ethynyl-2'-deoxyuridine labeling detects proliferating cells in the regenerating avian cochlea. Laryngoscope. 2009 Sep;119(9):1770-5.

化学性质

Cas No. 61135-33-9 SDF
别名 5-乙炔基-2-脱氧尿苷
Canonical SMILES O=C(NC(C(C#C)=C1)=O)N1[C@H]2C[C@H](O)[C@@H](CO)O2
分子式 C11H12N2O5 分子量 252.2
溶解度 DMF: 20 mg/mL,DMSO: 20 mg/mL; Water: 8 mg/mL (31.72 mM; ultrasonic and warming and heat to 37°C) 储存条件 4°C, protect from light
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1 mM 3.9651 mL 19.8255 mL 39.6511 mL
5 mM 0.793 mL 3.9651 mL 7.9302 mL
10 mM 0.3965 mL 1.9826 mL 3.9651 mL
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